<?xml version='1.0' encoding='UTF-8'?>
<smallbismark>
 <comment name='WARNING'>This is a draft version of small-BiSMark. Specification is the subject to change!</comment>
 <motif name='Deaf1' id='DEAF1.MTF'>
  <comment name='discrete information content by position'>[-0.944145209287943, -0.552942908751142, 0.0, 0.0, 0.0, -0.478749174278066]</comment>
  <comment name='discrete information content'>-1.97583729231715</comment>
  <comment name='number of sequences in the corresponding alignment'>10</comment>
  <PPM length='6'>
   <pm-column position='1'>
    <a>0.2</a>
    <c>0.4</c>
    <g>0.3</g>
    <t>0.1</t>
   </pm-column>
   <pm-column position='2'>
    <a>0.5</a>
    <c>0.5</c>
    <g>0.0</g>
    <t>0.0</t>
   </pm-column>
   <pm-column position='3'>
    <a>0.0</a>
    <c>1.0</c>
    <g>0.0</g>
    <t>0.0</t>
   </pm-column>
   <pm-column position='4'>
    <a>0.0</a>
    <c>0.0</c>
    <g>1.0</g>
    <t>0.0</t>
   </pm-column>
   <pm-column position='5'>
    <a>1.0</a>
    <c>0.0</c>
    <g>0.0</g>
    <t>0.0</t>
   </pm-column>
   <pm-column position='6'>
    <a>0.7</a>
    <c>0.0</c>
    <g>0.3</g>
    <t>0.0</t>
   </pm-column>
  </PPM>
  <PWM threshold='4.57475046259717' length='6'>
   <pm-column position='1'>
    <a>-0.324475438662139</a>
    <c>0.58981564315992</c>
    <g>0.318794890417998</g>
    <t>-0.899168711487208</t>
   </pm-column>
   <pm-column position='2'>
    <a>0.51336391223878</a>
    <c>0.802827505666355</c>
    <g>-2.39789527279837</g>
    <t>-2.39789527279837</t>
   </pm-column>
   <pm-column position='3'>
    <a>-2.39789527279837</a>
    <c>1.47539805565112</c>
    <g>-2.39789527279837</g>
    <t>-2.39789527279837</t>
   </pm-column>
   <pm-column position='4'>
    <a>-2.39789527279837</a>
    <c>-2.39789527279837</c>
    <g>1.47539805565112</g>
    <t>-2.39789527279837</t>
   </pm-column>
   <pm-column position='5'>
    <a>1.17893063566414</a>
    <c>-2.39789527279837</c>
    <g>-2.39789527279837</g>
    <t>-2.39789527279837</t>
   </pm-column>
   <pm-column position='6'>
    <a>0.834169151879551</a>
    <c>-2.39789527279837</c>
    <g>0.318794890417998</g>
    <t>-2.39789527279837</t>
   </pm-column>
  </PWM>
  <word-list size='12'>
   <word score='5.28068044004116'>GACGAG</word>
   <word score='5.15278437242258'>AACGAA</word>
   <word score='5.15278437242258'>AACGAA</word>
   <word score='5.15278437242258'>AACGAA</word>
   <word score='6.08551829493029'>GCCGAA</word>
   <word score='6.35653904767221'>CCCGAA</word>
   <word score='4.9268737043886'>ACCGAG</word>
   <word score='5.28068044004116'>GACGAG</word>
   <word score='6.06707545424463'>CACGAA</word>
   <word score='4.86755469302508'>TCCGAA</word>
   <word score='6.35653904767221'>CCCGAA</word>
   <word score='6.06707545424463'>CACGAA</word>
  </word-list>
 </motif>
</smallbismark>
